BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016H05LP1|AL427080
(949 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig862 1834 0.0
>3x_Contig862
Length = 2082
Score = 1834 bits (924), Expect = 0.0
Identities = 947/952 (99%), Gaps = 3/952 (0%)
Strand = Plus / Plus
Query: 1 gatcaaaagacccaacaagttgaaggccatttccttttgagagaatgtacggacacccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gatcaaaagacccaacaagttgaaggccatttccttttgagagaatgtacggacacccat 759
Query: 61 cttttcgataccttcagcaatgatgttattggcggacatcaaaccggtacctctggtcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 cttttcgataccttcagcaatgatgttattggcggacatcaaaccggtacctctggtcca 819
Query: 121 accaatgatagcaccacaaatggtcaattgattagcccaggattcagagtgccatctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 accaatgatagcaccacaaatggtcaattgattagcccaggattcagagtgccatctgtt 879
Query: 181 gaacaaagtttccaaagataacttggattccgagtacataccatccccaccgaaagtacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 gaacaaagtttccaaagataacttggattccgagtacataccatccccaccgaaagtacc 939
Query: 241 gtggttaggagacattggcaagataacttgagctggtctggtttcaattcctctggcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 gtggttaggagacattggcaagataacttgagctggtctggtttcaattcctctggcaga 999
Query: 301 tttttgcttcttgacacaacccattagtctcaagatattagtcaacatgattctgtgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 tttttgcttcttgacacaacccattagtctcaagatattagtcaacatgattctgtgagc 1059
Query: 361 gaattcagacttggaatcgatgttttctaattcgataccattttctggtatggcggcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 gaattcagacttggaatcgatgttttctaattcgataccattttctggtatggcggcaaa 1119
Query: 421 tggaatgatggcatctaagtcccagcctagaccgccgttcttttcgtcatcgtaaatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 tggaatgatggcatctaagtcccagcctagaccgccgttcttttcgtcatcgtaaatgaa 1179
Query: 481 gtcaatcaaaccttcaacatcttgtttggaaccttgattgamaggaacaacgactaaggt 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1180 gtcaatcaaaccttcaacatcttgtttggaaccttgattgaaaggaacaacgactaaggt 1239
Query: 541 tgaattcttagaaccatatttggcataaatagattggtagtagtcagtaaccttcttaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1240 tgaattcttagaaccatatttggcataaatagattggtagtagtcagtaaccttcttaga 1299
Query: 601 gaaacgagaagttgtgacgataaccttggcaccaccttgaactaaaccttgcaatacttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 gaaacgagaagttgtgacgataaccttggcaccaccttgaactaaaccttgcaatacttc 1359
Query: 661 agcaccaatggaaccagcaccggcaccagtgatcaaaacgtatttatccttgtaagtgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1360 agcaccaatggaaccagcaccggcaccagtgatcaaaacgtatttatccttgtaagtgac 1419
Query: 721 accgttgacagcagccttttctaaaccatccaagaacaaagaagatagttgacggtcata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 accgttgacagcagccttttctaaaccatccaagaacaaagaagatagttgacggtcata 1479
Query: 781 agcccattcaccacttggtaacttcttcttcaagtgcaagaatggaacggtttctcttgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 agcccattcaccacttggtaacttcttcttcaagtgcaagaatggaacggtttctcttgg 1539
Query: 841 aatagtagatgaaacggtcttgtcgatggcagacttcgttggtaaggaagcgacttcctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1540 aatagtagatgaaacggtcttgtcgatggcagacttcgttggtaaggaagcgacttcctt 1599
Query: 901 ggtggagt-cttgtcc-aarcatcttcatcgaca-cagctgctctagttgaa 949
|||||||| ||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 1600 ggtggagtccttgtccaaagcatcttcatcgacaccagctgctctagttgaa 1651
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7152
Number of Sequences: 1807
Number of extensions: 7152
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)